Position the oven rack in the upper 1/3 position. Preheat the oven to 500 degrees F. at least 30 minutes before baking, preferably 1-2 hours ahead. osition the oven rack in the upper 1/3 position. Preheat the oven to 500 degrees F. at least 30 minutes before baking, preferably 1-2 hours ahead.
Make the pizza dough. Add 2 tablespoons of olive oil to a baking sheet and roll out the dough. Cover with plastic wrap and let rise until it becomes pillowy.
Meanwhile, cook the bacon, drain on a paper towel and crumble. Set aside.
Stir together the olive oil, garlic, and red pepper flakes in a small bowl.
When the dough has risen, use a pastry brush to brush the entire crust with the garlic olive oil mixture. Sprinkle the cheese and top with caramelized onions and crumbled bacon.
Bake for 10 minutes, rotating halfway through. Remove from the oven when the crust is golden brown and the cheese is bubbling. Sprinkle with fresh thyme, and serve.